Welcome to Scgenome!#
scgenome is scalable python toolkit for analyzing single-cell whole genome data built on anndata and inspired by scanpy. scgenome includes preprocessing, visualization, and clustering functionality and can be used to analyze copy number, allele specific copy number, SNV and breakpoint features.
Check out the CONCEPTS section for further information, including how to INSTALL the project.
Note
This project is under active development.
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